Guide to Construction Industry Scheme (CIS) for Contractors
- Jones Financial Accounts

- Aug 18
- 4 min read
Introduction
If you’re running a construction business in the UK, chances are you’ve already heard of the Construction Industry Scheme (CIS). But knowing about it and actually staying compliant are two very different things. CIS is HMRC’s way of making sure tax is collected on payments made to subcontractors. For contractors, it’s not optional, it’s a legal requirement. Get it right, and you’ll keep your projects running smoothly. Get it wrong, and you could face penalties, cash flow issues, and unhappy subcontractors.
What is CIS
The Construction Industry Scheme (CIS) is a tax framework that governs how contractors pay subcontractors in the construction industry. Under CIS:
Contractors deduct tax at source before paying subcontractors (usually 20% if the subcontractor is registered, 30% if they’re not).
The contractor pays the deduction directly to HMRC, meaning subcontractors have already “prepaid” part of their tax bill.
Gross Payment Status can be applied for by subcontractors with a strong compliance record, allowing them to receive payments without deductions.
Why is this important? Because construction is historically a sector with high risks of undeclared income, CIS exists to make sure tax is collected upfront. For contractors, this means you’re not just managing payments, you’re acting as an unpaid tax collector for HMRC.
Why CIS Matters for Contractors
CIS compliance goes far beyond “just paperwork.” It’s about reputation, cost control, and long-term strategy:
Reputation with subcontractors: Skilled trades are in short supply. If word gets out that you don’t pay correctly or on time, subcontractors will choose other projects.
Cash flow control: Correct deductions and timely returns mean you can reconcile CIS with PAYE/NIC, avoiding nasty surprises at year-end.
Future opportunities: Many larger tenders (especially public contracts) require CIS compliance evidence. Poor records can knock you out of the bidding process.
In short: get CIS right, and you become a trusted contractor. Get it wrong, and you risk being left behind in a competitive market.
Why Professional Support Pays Off
On the surface, CIS may look like a simple set of deductions. In reality, it’s one of the most common areas where contractors fall foul of HMRC. A professional accountant adds value in several ways:
Time saved: Instead of spending hours checking deductions and deadlines, you can focus on running projects.
Accuracy guaranteed: We ensure subcontractors are verified, deductions are correct, and returns are submitted on time.
Strategic advantage: Beyond compliance, CIS data feeds into cash flow forecasting, budgeting, and project profitability analysis.
For a contractor with multiple subcontractors and projects, outsourcing CIS management is not just an admin convenience, it’s a way of protecting your margins and reputation.
Common Mistakes Contractors Make (and the Punishments)
Even experienced contractors trip up on CIS. Here are the most frequent mistakes, along with the consequences if HMRC gets involved:
Missing deadlines:
CIS returns are due by the 19th of every month. Even if no subcontractors were paid, you must file a “nil return.”
Penalty: £100 for missing the deadline, escalating to £200 after 2 months, £300 (or 5% of the CIS deductions) after 6 months, and up to £3,000 (or 10% of deductions) if still outstanding after 12 months.
Not verifying subcontractors:
Paying a subcontractor without verifying them with HMRC often leads to the wrong deduction rate.
Penalty: HMRC can hold the contractor liable for the difference, meaning you pay out of your own profits.
Incorrect deductions:
If you deduct at the wrong rate (e.g., gross when it should have been 20%), HMRC will expect you to make up the shortfall.
Penalty: You may be charged the unpaid tax plus interest and penalties for “careless” or “deliberate” errors.
Poor record-keeping:
Contractors must keep detailed CIS records, including payment and deduction statements.
Penalty: Up to £3,000 per tax year if HMRC finds records are missing or incomplete.
Assuming CIS is optional:
Some smaller contractors wrongly assume CIS doesn’t apply to them until they “grow bigger.” But as soon as you pay subcontractors for construction work, CIS applies.
Penalty: Fines, forced higher deduction rates (30% instead of 20%), and in severe cases, an HMRC compliance check that can lead to wider tax investigations.
Put simply, CIS mistakes are expensive. One late return could cost £100. A year of missed or incorrect returns could run into thousands in fines, plus potential tax liabilities.
For contractors operating at £1m+ turnover, those costs quickly escalate into tens of thousands and that’s before reputational damage.
Misconceptions About CIS Rules
Despite being around for years, there are still many myths about CIS that catch contractors out:
“CIS doesn’t apply if I only use subcontractors occasionally.” Wrong. If you pay subcontractors for construction work, even just once, you’re a contractor in HMRC’s eyes and CIS applies.
“CIS only covers labour costs.” Not entirely true. Some materials VAT are excluded from deductions, but labour, site preparation, and many construction-related services are covered. Misclassifying costs can lead to under-deductions.
“If I pay a limited company subcontractor, I don’t need to apply CIS.” False. CIS applies whether you pay individuals, partnerships, or companies. The structure doesn’t exempt you from verifying and deducting correctly.
“Gross Payment Status means I can forget about CIS.” Not quite. Subcontractors with Gross Payment Status still need to be reported monthly under CIS. You don’t deduct tax, but you must still include them on your return.
These misconceptions are costly because they give contractors a false sense of security, until HMRC steps in with penalties.
Key Takeaways
CIS is not optional, it’s a legal requirement for contractors.
Mistakes can cost thousands in penalties and damage your reputation with subcontractors.
Getting it right improves cash flow, secures future contracts, and builds trust.
Professional support takes the pressure off, ensuring compliance and freeing up your time.
Wrapping up today's insights, tomorrow we simplify another accounting challenge







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